安装MetaGeneMark-2报错解决

最新推荐文章于 2025-11-24 20:52:15 发布

原创最新推荐文章于 2025-11-24 20:52:15 发布 · 168 阅读

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一、安装

很简单，直接github下载文件即可

github链接：GitHub - gatech-genemark/MetaGeneMark-2: MetaGeneMark-2: Improved Gene Prediction in Metagenomes

Linux系统中

# 下载文件
git clone  https://github.com/gatech-genemark/MetaGeneMark-2.git

# 安装
 cd src;
 pf_makefile=Makefile.ubuntu    # NOTE: change based on operating system
 make -f $pf_makefile

报错问题

/usr/bin/ld: sequence_map_2.o:sequence_map_2.cpp:(.text+0x161d): more undefined references to `MultiShiftSite::get_site_with_max_score(std::vector<unsigned char, std::allocator<unsigned char> > const&, unsigned int, unsigned int, bool) const' follow
collect2: error: ld returned 1 exit status
make: *** [Makefile.ubuntu:38: gmhmmp2] Error 1