R语言read.table函数

本文详细解析了R语言中read.table函数的各项参数及其用途,包括如何指定文件路径、处理缺失值、定义分隔符等内容。

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read.table(file, header = FALSE, sep = "", quote = "\"'",
           dec = ".", numerals = c("allow.loss", "warn.loss", "no.loss"),
           row.names, col.names, as.is = !stringsAsFactors,
           na.strings = "NA", colClasses = NA, nrows = -1,
           skip = 0, check.names = TRUE, fill = !blank.lines.skip,
           strip.white = FALSE, blank.lines.skip = TRUE,
           comment.char = "#",
           allowEscapes = FALSE, flush = FALSE,
           stringsAsFactors = default.stringsAsFactors(),
           fileEncoding = "", encoding = "unknown", text, skipNul = FALSE)

file 文件名,在windows系统下可为“dir\\example.txt”,在linux系统下为“dir/example.txt”

 

header

header设置为TRUE,表示第一行的内容是每一列的名字

sep

分隔符,默认sep = ""(空格)

quote

quote只对被当做character的列有效

dec

the character used in the file for decimal points.

numerals

string indicating how to convert numbers whose conversion to double precision would lose accuracy

row.names

行名的向量

col.names

列名的向量

as.is

the default behavior of read.table is to convert character variables (which are not converted to logical, numeric or complex) to factors. The variable as.is controls the conversion of columns not otherwise specified by colClasses. Its value is either a vector of logicals (values are recycled if necessary), or a vector of numeric or character indices which specify which columns should not be converted to factors.

Note: to suppress all conversions including those of numeric columns, set colClasses = "character".

Note that as.is is specified per column (not per variable) and so includes the column of row names (if any) and any columns to be skipped.

na.strings

a character vector of strings which are to be interpreted as NA values. Blank fields are also considered to be missing values in logical, integer, numeric and complex fields. Note that the test happens after white space is stripped from the input, so na.strings values may need their own white space stripped in advance.

colClasses

表示读出的列的类型("character"、"numeric"、"Date"等)

nrows

正整数,表示读入的最大行数

skip

integer: the number of lines of the data file to skip before beginning to read data.

check.names

logical. If TRUE then the names of the variables in the data frame are checked to ensure that they are syntactically valid variable names. If necessary they are adjusted (by make.names) so that they are, and also to ensure that there are no duplicates.

fill

logical. If TRUE then in case the rows have unequal length, blank fields are implicitly added. See ‘Details’.

strip.white

logical. Used only when sep has been specified, and allows the stripping of leading and trailing white space from unquoted character fields (numeric fields are always stripped). See scan for further details (including the exact meaning of ‘white space’), remembering that the columns may include the row names.

blank.lines.skip

logical: if TRUE blank lines in the input are ignored.

comment.char

character: a character vector of length one containing a single character or an empty string. Use "" to turn off the interpretation of comments altogether.

allowEscapes

logical. Should C-style escapes such as \n be processed or read verbatim (the default)? Note that if not within quotes these could be interpreted as a delimiter (but not as a comment character). For more details see scan.

flush

logical: if TRUEscan will flush to the end of the line after reading the last of the fields requested. This allows putting comments after the last field.

stringsAsFactors

logical: should character vectors be converted to factors? Note that this is overridden by as.is and colClasses, both of which allow finer control.

fileEncoding

character string: if non-empty declares the encoding used on a file (not a connection) so the character data can be re-encoded. See the ‘Encoding’ section of the help for file, the ‘R Data Import/Export Manual’ and ‘Note’.

encoding

encoding to be assumed for input strings. It is used to mark character strings as known to be in Latin-1 or UTF-8 (see Encoding): it is not used to re-encode the input, but allows R to handle encoded strings in their native encoding (if one of those two). See ‘Value’ and ‘Note’.

text

character string: if file is not supplied and this is, then data are read from the value of text via a text connection. Notice that a literal string can be used to include (small) data sets within R code.

skipNul

logical: should nuls be skipped?

  

### R语言 `read.table` 函数因 Permission Denied 导致的报错解决方案 在使用 R 的 `read.table` 函数读取数据文件时,如果遇到 `Permission denied` 错误,则表明当前运行环境下的用户没有足够的权限访问目标文件。以下是可能的原因及对应的解决方法: #### 1. 文件路径问题 确保指定的文件路径正确无误,并且文件确实存在于该路径下。可以通过以下方式验证: ```r file.exists("path/to/your/file.csv") # 返回 TRUE 或 FALSE ``` #### 2. 权限不足 如果文件存在但仍无法访问,可能是由于操作系统级别的权限限制。可以检查并修改文件权限。 ##### Linux/MacOS 系统 在终端中运行以下命令以更改文件权限: ```bash chmod 644 path/to/your/file.csv ``` 或者赋予所有人可读写权限(仅用于测试场景): ```bash chmod 777 path/to/your/file.csv ``` ##### Windows 系统 右键点击文件 -> 属性 -> 安全选项卡,确认当前用户具有“完全控制”或其他必要的权限。 #### 3. 用户身份问题 当 R 脚本由特定服务或进程调用时(如 Web 应用服务器),可能会以不同的用户身份运行。这种情况下需要确保运行脚本的用户有权限访问目标文件。例如,在 Hadoop 场景中,用户 `dr.who` 缺乏对某些目录的访问权[^3],类似的逻辑也适用于本地文件系统。 #### 4. 使用绝对路径而非相对路径 有时相对路径可能导致意外行为。建议始终使用完整的绝对路径来定位文件。 #### 5. 特殊字符处理 如果文件名中含有特殊字符(如空格、括号等),需适当转义或将整个路径用双引号包裹起来。例如: ```r data <- read.table("C:/Users/Example User/Documents/data.csv", header = TRUE) ``` #### 示例代码修正版 假设原始代码如下: ```r data <- read.table("./data.csv", sep=",", header=TRUE) ``` 改为显式指明完整路径以及调整权限后重试: ```r data <- read.table("/home/user/project/data.csv", sep=",", header=TRUE) # 对于Linux/MacOS # 或者对于Windows: data <- read.table("C:\\Users\\User\\project\\data.csv", sep=",", header=TRUE) ``` 以上措施应能有效缓解大部分与 `Permission denied` 相关的问题。若仍存在问题,请进一步排查具体环境配置细节。 ---
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