CIRCOS教程翻译 3.2——Embedded in Data File

紧跟上一节的内容，主配置文件有变化，其实就是将输入文件直接格式化成颜色位置等等，没有必要一步一步的画了，文件格式如下：

hs1 1298972 1300443 fill_color=blue
hs1 1311738 1324571 fill_color=red,r0=0.6r,r1=0.6r+50p
hs1 1397026 1421444 fill_color=green,r0=1.1r,r1=1.15r
hs1 1437417 1459927 fill_color=green,r0=1.1r,r1=1.15r
hs1 1540746 1555847 fill_color=yellow
hs1 1560962 1645635 fill_color=purple
hs1 1624179 1645623 fill_color=grey

类似于上面的格式，主配置文件：

<<include colors_fonts_patterns.conf>>

<<include ideogram.conf>>
<<include ticks.conf>>

<image>
<<include etc/image.conf>>
</image>

karyotype   = data/karyotype/karyotype.human.txt

chromosomes_units  = 1000000
chromosomes        = hs1;hs2;hs3
chromosomes_display_default = no

<highlights>
z          = 0
fill_color = green

<highlight>
file       = data/3/genes.formatted.large.txt #默认的位置及颜色
r0         = 0.7r
r1         = 0.7r + 200p
</highlight>

</highlights>

<<include etc/housekeeping.conf>>