Python_API_os.path_exists_待填充

本文详细介绍了Python中os.path.exists函数的使用方法。该函数用于判断指定路径是否存在,并返回布尔值。对于损坏的符号链接,即使路径存在也会返回False。值得注意的是,在某些平台上,如果请求文件的os.stat权限被拒绝,则即使路径实际存在也可能返回False。
os.path.exists(path)
Return True if path refers to an existing path. Returns False for broken symbolic links. On some platforms, this function may return False if permission is not granted to execute os.stat() on the requested file, even if the path physically exists.

else: print('Normal') # process in parallel if parallel: print('Reshape reconstructed volumes in parallel') max_processes = 10 list_of_arguments = [] reconstructed_dir = os.path.join(os.path.abspath(args.output_dir), 'reconstructed_niftis') reshaped_dir = os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_reshaped') if os.path.exists(reshaped_dir) == False: os.makedirs(reshaped_dir) for plane in planes: for sub in full_subject_list: list_of_arguments.append((sub, plane, reconstructed_dir, reshaped_dir)) # spawn up to 10 processes at a time with multiprocessing.Pool(processes=max_processes) as pool: pool.starmap(reshape_reconstructed_volumes.reshape_t1_t2_flair, list_of_arguments) # run in series else: reshape_reconstructed_volumes.iterate_for_each_plane( subject_list=full_subject_list, data_dir=os.path.abspath(args.output_dir), out_dir=os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_reshaped') ) print('Finished reshaping reconstructed volumes') print('Coregister reshaped reconstructed volumes') # coregister reshaped reconstructed volumes if ensemble: print('Ensemble') coregister_reshaped_reconstructed_volumes_ensemble.coregister_all_folds( subs_file=os.path.abspath(args.subs_file), data_dir=os.path.abspath(args.output_dir), out_dir=os.path.abspath(args.output_dir), n_splits=12 ) else: print('Normal') coregister_reshaped_reconstructed_volumes.coregister_all_subjects( subjects_list=full_subject_list, data_dir=os.path.abspath(args.output_dir), output_dir=os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_reshaped_coregistered') ) print('Finished coregistering reshaped reconstructed volumes') print('Filtering volumes using wavelet transform') if ensemble: if parallel: print('Ensemble') wavelet_transform_filter_ensemble.filter_in_parallel( subs_file=os.path.abspath(args.subs_file), path=os.path.abspath(args.output_dir), output_dir=os.path.abspath(args.output_dir), n_splits=12, decNum=8, wname='db25', damp_sigma=8 ) else: wavelet_transform_filter_ensemble.filter_in_series( subs_file=os.path.abspath(args.subs_file), path=os.path.abspath(args.output_dir), output_dir=os.path.abspath(args.output_dir), n_splits=12, decNum=8, wname='db25', damp_sigma=8 ) else: print('Normal') if parallel: wavelet_transform_filter.filter_in_parallel( subjects=full_subject_list, path=os.path.abspath(args.output_dir), output_dir=os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_reshaped_coregistered_filtered'), decNum=8, wname='db25', damp_sigma=8 ) else: wavelet_transform_filter.filter_in_series( subjects=full_subject_list, path=os.path.abspath(args.output_dir), output_dir=os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_reshaped_coregistered_filtered'), decNum=8, wname='db25', damp_sigma=8 ) print('Finished filtering volumes using wavelet transform') print('Coregistering filtered outputs') if ensemble: coregister_filtered_outputs_ensemble.coregister_all_subjects( subs_file=os.path.abspath(args.subs_file), ensemble_output_dir=os.path.abspath(args.output_dir), n_splits=12 ) print('Finished coregistering filtered outputs') # average the outputs across each fold to increase signal-to-noise ratio if ensemble: print('Averaging filtered volumes') if parallel: print('Averaging in parallel') averaging_filtered_ensemble.iterate_in_parallel( subs_file=os.path.abspath(args.subs_file), input_dir=os.path.abspath(args.output_dir), output_dir=os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_filtered_averaged_across_folds'), n_splits=12 ) else: print('Averaging in series') averaging_filtered_ensemble.iterate_for_each_sub( subs_file=os.path.abspath(args.subs_file), input_dir=os.path.abspath(args.output_dir), output_dir=os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_filtered_averaged_across_folds'), n_splits=12 ) print('Finished averaging filtered volumes') print('Unpadding volumes to original shape') if ensemble: if parallel: unpad.unpad_parallel( subjects=full_subject_list, padded_dir=os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_filtered_averaged_across_folds'), orig_dir=os.path.abspath(args.data), output_dir=os.path.join(os.path.abspath(args.output_dir), 'LowGAN_outputs') ) else: unpad.unpad_series( subjects=full_subject_list, padded_dir=os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_filtered_averaged_across_folds'), orig_dir=os.path.abspath(args.data), output_dir=os.path.join(os.path.abspath(args.output_dir), 'LowGAN_outputs') ) else: if parallel: unpad.unpad_parallel( subjects=full_subject_list, padded_dir=os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_reshaped_coregistered_filtered'), orig_dir=os.path.abspath(args.data), output_dir=os.path.join(os.path.abspath(args.output_dir), 'LowGAN_outputs') ) else: unpad.unpad_series( subjects=full_subject_list, padded_dir=os.path.join(os.path.abspath(args.output_dir), 'recon_niftis_reshaped_coregistered_filtered'), orig_dir=os.path.abspath(args.data), output_dir=os.path.join(os.path.abspath(args.output_dir), 'LowGAN_outputs') ) print('Finished unpadding volumes to original shape') if intermediates: print('Moving intermediate outputs to intermediates directory') if os.path.exists(os.path.join(os.path.abspath(args.output_dir), 'intermediates')) == False: os.makedirs(os.path.join(os.path.abspath(args.output_dir), 'intermediates')) # we will move only the specific directories that were generated by LowGAN to the intermediates directory # to make sure that we don't mess with any other files that may be in the output directory planes = ['axial', 'coronal', 'sagittal'] for plane in planes: os.system(f'mv {os.path.join(os.path.abspath(args.output_dir), f"dataset_{plane}_pix2pix")} {os.path.join(os.path.abspath(args.output_dir), "intermediates")}') if ensemble: folds = [f'fold_{fold}' for fold in range(0, 12)] for fold in folds: os.system(f'mv {os.path.join(os.path.abspath(args.output_dir), fold)} {os.path.join(os.path.abspath(args.output_dir), "intermediates")}') os.system(f'mv {os.path.join(os.path.abspath(args.output_dir), "recon_niftis_filtered_averaged_across_folds")} {os.path.join(os.path.abspath(args.output_dir), "intermediates")}') else: os.system(f'mv {os.path.join(os.path.abspath(args.output_dir), "results_LowGAN")} {os.path.join(os.path.abspath(args.output_dir), "intermediates")}') os.system(f'mv {os.path.join(os.path.abspath(args.output_dir), "reconstructed_niftis")} {os.path.join(os.path.abspath(args.output_dir), "intermediates")}') os.system(f'mv {os.path.join(os.path.abspath(args.output_dir), "recon_niftis_reshaped")} {os.path.join(os.path.abspath(args.output_dir), "intermediates")}') os.system(f'mv {os.path.join(os.path.abspath(args.output_dir), "recon_niftis_reshaped_coregistered")} {os.path.join(os.path.abspath(args.output_dir), "intermediates")}') os.system(f'mv {os.path.join(os.path.abspath(args.output_dir), "recon_niftis_reshaped_coregistered_filtered")} {os.path.join(os.path.abspath(args.output_dir), "intermediates")}') print('Finished moving intermediate outputs to intermediates directory')改为中文注释
07-08
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