Apex安装踩坑

在CentOS系统中安装Apex时遇到了一系列问题,包括pytorch与cuda版本对应问题,需要确保两者匹配。接着是gcc版本升级,由于默认版本为4.8.5,需通过yum安装指定版本的gcc。在升级gcc过程中,遭遇了nvidia-docker的GPG验证错误,通过关闭GPG验证机制解决。最后,apex安装成功后,在使用时发现EncdecMultiheadAttn模块找不到,通过修改安装命令并指定具体路径解决了该问题。

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apex

1.0 pytorch版本、cuda版本的对应问题

安装apex需要机器上的pytorch版本和cuda是对应的版本,否则报错。
cuda版本查看 cat /usr/local/cuda/version.txt
https://pytorch.org/get-started/previous-versions/

2.0 gcc版本问题

centos默认gcc4.8.5,不满足apex需要的gcc版本大于5.0。可以使用yum安装并指定gcc版本
笔者参考 https://www.cnblogs.com/jixiaohua/p/11732225.html
若scl enable devtoolset-8 bash 命令失败,gcc 版本没变,那么直接去/opt/rh/devtoolset-8 下面enable 即可

2.1 yum更新gcc过程中遇到nvidia-docker的GPG验证问题

yum install centos-release-scl
命令报错:
repomd.xml signature could not be verified for nvidia-docker
参考
https://blog.youkuaiyun.com/u012560213/article/details/101430549
关闭GPG key的验证机制解决

3.0 apex安装后,发现EncdecMultiheadAttn module找不到的问题

quickstart上的安装命令不得行,需要uninstall,然后具体指定,使用连接上的命令
https://github.com/NVIDIA/a

自编译tensorflow: 1.python3.5,tensorflow1.12; 2.支持cuda10.0,cudnn7.3.1,TensorRT-5.0.2.6-cuda10.0-cudnn7.3; 3.支持mkl,无MPI; 软硬件硬件环境:Ubuntu16.04,GeForce GTX 1080 配置信息: hp@dla:~/work/ts_compile/tensorflow$ ./configure WARNING: --batch mode is deprecated. Please instead explicitly shut down your Bazel server using the command "bazel shutdown". You have bazel 0.19.1 installed. Please specify the location of python. [Default is /usr/bin/python]: /usr/bin/python3 Found possible Python library paths: /usr/local/lib/python3.5/dist-packages /usr/lib/python3/dist-packages Please input the desired Python library path to use. Default is [/usr/local/lib/python3.5/dist-packages] Do you wish to build TensorFlow with XLA JIT support? [Y/n]: XLA JIT support will be enabled for TensorFlow. Do you wish to build TensorFlow with OpenCL SYCL support? [y/N]: No OpenCL SYCL support will be enabled for TensorFlow. Do you wish to build TensorFlow with ROCm support? [y/N]: No ROCm support will be enabled for TensorFlow. Do you wish to build TensorFlow with CUDA support? [y/N]: y CUDA support will be enabled for TensorFlow. Please specify the CUDA SDK version you want to use. [Leave empty to default to CUDA 10.0]: Please specify the location where CUDA 10.0 toolkit is installed. Refer to README.md for more details. [Default is /usr/local/cuda]: /usr/local/cuda-10.0 Please specify the cuDNN version you want to use. [Leave empty to default to cuDNN 7]: 7.3.1 Please specify the location where cuDNN 7 library is installed. Refer to README.md for more details. [Default is /usr/local/cuda-10.0]: Do you wish to build TensorFlow with TensorRT support? [y/N]: y TensorRT support will be enabled for TensorFlow. Please specify the location where TensorRT is installed. [Default is /usr/lib/x86_64-linux-gnu]:/home/hp/bin/TensorRT-5.0.2.6-cuda10.0-cudnn7.3/targets/x86_64-linux-gnu Please specify the locally installed NCCL version you want to use. [Default is to use https://github.com/nvidia/nccl]: Please specify a list of comma-separated Cuda compute capabilities you want to build with. You can find the compute capability of your device at: https://developer.nvidia.com/cuda-gpus. Please note that each additional compute capability significantly increases your build time and binary size. [Default is: 6.1,6.1,6.1]: Do you want to use clang as CUDA compiler? [y/N]: nvcc will be used as CUDA compiler. Please specify which gcc should be used by nvcc as the host compiler. [Default is /usr/bin/gcc]: Do you wish to build TensorFlow with MPI support? [y/N]: No MPI support will be enabled for TensorFlow. Please specify optimization flags to use during compilation when bazel option "--config=opt" is specified [Default is -march=native -Wno-sign-compare]: Would you like to interactively configure ./WORKSPACE for Android builds? [y/N]: Not configuring the WORKSPACE for Android builds. Preconfigured Bazel build configs. You can use any of the below by adding "--config=" to your build command. See .bazelrc for more details. --config=mkl # Build with MKL support. --config=monolithic # Config for mostly static monolithic build. --config=gdr # Build with GDR support. --config=verbs # Build with libverbs support. --config=ngraph # Build with Intel nGraph support. --config=dynamic_kernels # (Experimental) Build kernels into separate shared objects. Preconfigured Bazel build configs to DISABLE default on features: --config=noaws # Disable AWS S3 filesystem support. --config=nogcp # Disable GCP support. --config=nohdfs # Disable HDFS support. --config=noignite # Disable Apacha Ignite support. --config=nokafka # Disable Apache Kafka support. --config=nonccl # Disable NVIDIA NCCL support. Configuration finished 编译: hp@dla:~/work/ts_compile/tensorflow$ bazel build --config=opt --config=mkl --verbose_failures //tensorflow/tools/pip_package:build_pip_package 卸载已有tensorflow: hp@dla:~/temp$ sudo pip3 uninstall tensorflow 安装自己编译的成果: hp@dla:~/temp$ sudo pip3 install tensorflow-1.12.0-cp35-cp35m-linux_x86_64.whl
自编译tensorflow: 1.python3.5,tensorflow1.12; 2.支持cuda10.0,cudnn7.3.1,TensorRT-5.0.2.6-cuda10.0-cudnn7.3; 3.无mkl支持; 软硬件硬件环境:Ubuntu16.04,GeForce GTX 1080 TI 配置信息: hp@dla:~/work/ts_compile/tensorflow$ ./configure WARNING: --batch mode is deprecated. Please instead explicitly shut down your Bazel server using the command "bazel shutdown". You have bazel 0.19.1 installed. Please specify the location of python. [Default is /usr/bin/python]: /usr/bin/python3 Found possible Python library paths: /usr/local/lib/python3.5/dist-packages /usr/lib/python3/dist-packages Please input the desired Python library path to use. Default is [/usr/local/lib/python3.5/dist-packages] Do you wish to build TensorFlow with XLA JIT support? [Y/n]: XLA JIT support will be enabled for TensorFlow. Do you wish to build TensorFlow with OpenCL SYCL support? [y/N]: No OpenCL SYCL support will be enabled for TensorFlow. Do you wish to build TensorFlow with ROCm support? [y/N]: No ROCm support will be enabled for TensorFlow. Do you wish to build TensorFlow with CUDA support? [y/N]: y CUDA support will be enabled for TensorFlow. Please specify the CUDA SDK version you want to use. [Leave empty to default to CUDA 10.0]: Please specify the location where CUDA 10.0 toolkit is installed. Refer to README.md for more details. [Default is /usr/local/cuda]: /usr/local/cuda-10.0 Please specify the cuDNN version you want to use. [Leave empty to default to cuDNN 7]: 7.3.1 Please specify the location where cuDNN 7 library is installed. Refer to README.md for more details. [Default is /usr/local/cuda-10.0]: Do you wish to build TensorFlow with TensorRT support? [y/N]: y TensorRT support will be enabled for TensorFlow. Please specify the location where TensorRT is installed. [Default is /usr/lib/x86_64-linux-gnu]://home/hp/bin/TensorRT-5.0.2.6-cuda10.0-cudnn7.3/targets/x86_64-linux-gnu Please specify the locally installed NCCL version you want to use. [Default is to use https://github.com/nvidia/nccl]: Please specify a list of comma-separated Cuda compute capabilities you want to build with. You can find the compute capability of your device at: https://developer.nvidia.com/cuda-gpus. Please note that each additional compute capability significantly increases your build time and binary size. [Default is: 6.1,6.1,6.1]: Do you want to use clang as CUDA compiler? [y/N]: nvcc will be used as CUDA compiler. Please specify which gcc should be used by nvcc as the host compiler. [Default is /usr/bin/gcc]: Do you wish to build TensorFlow with MPI support? [y/N]: No MPI support will be enabled for TensorFlow. Please specify optimization flags to use during compilation when bazel option "--config=opt" is specified [Default is -march=native -Wno-sign-compare]: Would you like to interactively configure ./WORKSPACE for Android builds? [y/N]: Not configuring the WORKSPACE for Android builds. Preconfigured Bazel build configs. You can use any of the below by adding "--config=" to your build command. See .bazelrc for more details. --config=mkl # Build with MKL support. --config=monolithic # Config for mostly static monolithic build. --config=gdr # Build with GDR support. --config=verbs # Build with libverbs support. --config=ngraph # Build with Intel nGraph support. --config=dynamic_kernels # (Experimental) Build kernels into separate shared objects. Preconfigured Bazel build configs to DISABLE default on features: --config=noaws # Disable AWS S3 filesystem support. --config=nogcp # Disable GCP support. --config=nohdfs # Disable HDFS support. --config=noignite # Disable Apacha Ignite support. --config=nokafka # Disable Apache Kafka support. --config=nonccl # Disable NVIDIA NCCL support. Configuration finished 编译: bazel build --config=opt --verbose_failures //tensorflow/tools/pip_package:build_pip_package 卸载已有tensorflow: hp@dla:~/temp$ sudo pip3 uninstall tensorflow 安装自己编译的成果: hp@dla:~/temp$ sudo pip3 install tensorflow-1.12.0-cp35-cp35m-linux_x86_64.whl
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