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fasta.img 是什么文件?
fasta.img 是什么文件?BwaMemIndexImageCreator生成.img为GATK BWA所需 "gatk BwaMemIndexImageCreator -I reference.fasta -O reference.fasta.img"GATK参考序列的操作(操作FASTA格式的序列)原创 2021-07-21 12:41:30 · 241 阅读 · 1 评论 -
R-error: 错误: nul character not allowed (line 1)
路径中加转义字符Validate a character as a file path?确定字符是否为有效文件路径的最佳方法是什么? 因此CheckFilePath(“my*file.csv”)将返回FALSE(在Windows *上是无效字符),而CheckFilePath(“c:\users\blabla\desktop\myfile.csv” )将返回TRUE。...原创 2021-07-19 11:04:52 · 2398 阅读 · 0 评论 -
基因名2-MAR等错误名字产生原因
数据导入Microsoft Excel后,部分基因名会自动转换为日期或浮点。源格式 导入Excel后的格式MARC1 1-MarMARCH1 1-MarDEC1 1-Dec231012E4 2.31E+09123E1 1.23E+03基因MARC1和基因MARCH1均被转换成了1-Mar。原创 2021-07-16 12:41:12 · 2366 阅读 · 1 评论 -
cannot create temp file for here-document
cd /tmprm *.tmp原创 2021-07-07 16:14:45 · 363 阅读 · 0 评论 -
samtools sort fails when using too many tmp files
error:samtools sort: fail to open "****.sorted.bam.tmp.1020.bam": Too many open filesincrease the RAM allowance for samtools sort (with -m 1500M or -m 2G, for example) such that there are fewer (larger) temp files to mergecommand :samtools sort -m 2原创 2021-07-05 10:38:31 · 1283 阅读 · 0 评论 -
[E::fai_build_core] Different line length in sequence ‘kraken:taxid|436|NZ_CP062147.1‘
ERROR record:下载了所有细菌fna后,整合成一整个fna文件,大小99G.samtools faidx library.fnaerror:[E::fai_build_core] Different line length in sequence 'kraken:taxid|436|NZ_CP062147.1'googleDid you take a look at that sequence in question? It may be just acase of a broke原创 2021-06-21 17:18:06 · 1151 阅读 · 0 评论